Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr3Q9DCF9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssr3Q9DCF9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Gm43566-201ENSMUST00000196851 808 ntBASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssr3Q9DCF9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssr3Q9DCF9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssr3Q9DCF9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ssr3Q9DCF9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.58■□□□□ 0.25
Ssr3Q9DCF9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssr3Q9DCF9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssr3Q9DCF9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssr3Q9DCF9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssr3Q9DCF9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Fst-202ENSMUST00000223640 2612 ntBASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssr3Q9DCF9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr3Q9DCF9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr3Q9DCF9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr3Q9DCF9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssr3Q9DCF9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ssr3Q9DCF9 Gm13238-201ENSMUST00000117655 780 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms