Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rsph9Q9D9V4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rsph9Q9D9V4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rsph9Q9D9V4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Gm22240-201ENSMUST00000175225 82 ntBASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rsph9Q9D9V4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rsph9Q9D9V4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rsph9Q9D9V4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.12■□□□□ 0.49
Rsph9Q9D9V4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rsph9Q9D9V4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.12■□□□□ 0.49
Rsph9Q9D9V4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Rsph9Q9D9V4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rsph9Q9D9V4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rsph9Q9D9V4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rsph9Q9D9V4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rsph9Q9D9V4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rsph9Q9D9V4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rsph9Q9D9V4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rsph9Q9D9V4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rsph9Q9D9V4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rsph9Q9D9V4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rsph9Q9D9V4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.09■□□□□ 0.49
Rsph9Q9D9V4 Trmt13-210ENSMUST00000198454 880 ntBASIC18.09■□□□□ 0.49
Rsph9Q9D9V4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms