Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a3Q9D554 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a3Q9D554 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a3Q9D554 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.79■□□□□ 0.6
Sf3a3Q9D554 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a3Q9D554 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a3Q9D554 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a3Q9D554 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a3Q9D554 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a3Q9D554 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.79■□□□□ 0.6
Sf3a3Q9D554 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a3Q9D554 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sf3a3Q9D554 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a3Q9D554 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Gm10232-201ENSMUST00000089221 720 ntBASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a3Q9D554 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.77■□□□□ 0.6
Sf3a3Q9D554 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3a3Q9D554 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3a3Q9D554 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3a3Q9D554 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3a3Q9D554 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3a3Q9D554 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Gm9870-201ENSMUST00000063874 645 ntBASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sf3a3Q9D554 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms