Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfdn1Q9CWM4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfdn1Q9CWM4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfdn1Q9CWM4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfdn1Q9CWM4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pfdn1Q9CWM4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfdn1Q9CWM4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pfdn1Q9CWM4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfdn1Q9CWM4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pfdn1Q9CWM4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.33■□□□□ 0.21
Pfdn1Q9CWM4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pfdn1Q9CWM4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pfdn1Q9CWM4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pfdn1Q9CWM4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pfdn1Q9CWM4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pfdn1Q9CWM4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn1Q9CWM4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn1Q9CWM4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn1Q9CWM4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn1Q9CWM4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn1Q9CWM4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pfdn1Q9CWM4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms