Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Gm12251-201ENSMUST00000117893 792 ntBASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska1Q9CPV1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ska1Q9CPV1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Gm8493-201ENSMUST00000196881 489 ntBASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska1Q9CPV1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.41■□□□□ 0.38
Ska1Q9CPV1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska1Q9CPV1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Gm11421-201ENSMUST00000122124 294 ntBASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ska1Q9CPV1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ska1Q9CPV1 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.39■□□□□ 0.37
Ska1Q9CPV1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ska1Q9CPV1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ska1Q9CPV1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ska1Q9CPV1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ska1Q9CPV1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ska1Q9CPV1 Smad6-203ENSMUST00000179458 273 ntBASIC17.39■□□□□ 0.37
Ska1Q9CPV1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.39■□□□□ 0.37
Ska1Q9CPV1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms