Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Raf1Q99N57 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.58■□□□□ 0.24
Raf1Q99N57 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Raf1Q99N57 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.57■□□□□ 0.24
Raf1Q99N57 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.57■□□□□ 0.24
Raf1Q99N57 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Raf1Q99N57 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Raf1Q99N57 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Raf1Q99N57 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Raf1Q99N57 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Raf1Q99N57 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.56■□□□□ 0.24
Raf1Q99N57 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Raf1Q99N57 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.56■□□□□ 0.24
Raf1Q99N57 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.56■□□□□ 0.24
Raf1Q99N57 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.56■□□□□ 0.24
Raf1Q99N57 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Raf1Q99N57 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.56■□□□□ 0.24
Raf1Q99N57 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.56■□□□□ 0.24
Raf1Q99N57 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Raf1Q99N57 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.56■□□□□ 0.24
Raf1Q99N57 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Raf1Q99N57 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raf1Q99N57 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Raf1Q99N57 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Raf1Q99N57 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Raf1Q99N57 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Raf1Q99N57 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Gm42642-201ENSMUST00000200683 355 ntBASIC16.55■□□□□ 0.24
Raf1Q99N57 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Spcs1-204ENSMUST00000226782 949 ntBASIC16.55■□□□□ 0.24
Raf1Q99N57 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Raf1Q99N57 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Raf1Q99N57 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Raf1Q99N57 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raf1Q99N57 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raf1Q99N57 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Raf1Q99N57 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Raf1Q99N57 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Raf1Q99N57 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Raf1Q99N57 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raf1Q99N57 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raf1Q99N57 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Raf1Q99N57 Gm26571-201ENSMUST00000181399 666 ntBASIC16.54■□□□□ 0.24
Raf1Q99N57 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.54■□□□□ 0.24
Raf1Q99N57 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Raf1Q99N57 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raf1Q99N57 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Raf1Q99N57 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raf1Q99N57 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.54■□□□□ 0.24
Raf1Q99N57 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Raf1Q99N57 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Raf1Q99N57 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Raf1Q99N57 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.53■□□□□ 0.24
Raf1Q99N57 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.53■□□□□ 0.24
Raf1Q99N57 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Raf1Q99N57 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raf1Q99N57 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms