Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.21■□□□□ 0.19
Scrt1Q99M85 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Scrt1Q99M85 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scrt1Q99M85 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scrt1Q99M85 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Gm7860-201ENSMUST00000121190 879 ntBASIC16.19■□□□□ 0.18
Scrt1Q99M85 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scrt1Q99M85 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Gm2559-201ENSMUST00000201323 363 ntBASIC16.18■□□□□ 0.18
Scrt1Q99M85 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scrt1Q99M85 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.17■□□□□ 0.18
Scrt1Q99M85 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scrt1Q99M85 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.16■□□□□ 0.18
Scrt1Q99M85 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scrt1Q99M85 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scrt1Q99M85 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scrt1Q99M85 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scrt1Q99M85 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scrt1Q99M85 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scrt1Q99M85 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scrt1Q99M85 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scrt1Q99M85 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scrt1Q99M85 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scrt1Q99M85 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scrt1Q99M85 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.15■□□□□ 0.18
Scrt1Q99M85 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.15■□□□□ 0.18
Scrt1Q99M85 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scrt1Q99M85 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scrt1Q99M85 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scrt1Q99M85 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Scrt1Q99M85 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Scrt1Q99M85 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Scrt1Q99M85 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scrt1Q99M85 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scrt1Q99M85 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.14■□□□□ 0.17
Scrt1Q99M85 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Scrt1Q99M85 Gm10698-201ENSMUST00000182663 604 ntBASIC16.14■□□□□ 0.17
Scrt1Q99M85 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scrt1Q99M85 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.14■□□□□ 0.17
Scrt1Q99M85 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scrt1Q99M85 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms