Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.44■□□□□ 0.54
Pcdhb3Q91XZ7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb3Q91XZ7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb3Q91XZ7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdhb3Q91XZ7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb3Q91XZ7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb3Q91XZ7 Mir7075-201ENSMUST00000184187 82 ntBASIC18.43■□□□□ 0.54
Pcdhb3Q91XZ7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb3Q91XZ7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb3Q91XZ7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.42■□□□□ 0.54
Pcdhb3Q91XZ7 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.41■□□□□ 0.54
Pcdhb3Q91XZ7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb3Q91XZ7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb3Q91XZ7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb3Q91XZ7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Pcdhb3Q91XZ7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb3Q91XZ7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb3Q91XZ7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.41■□□□□ 0.54
Pcdhb3Q91XZ7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb3Q91XZ7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb3Q91XZ7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb3Q91XZ7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb3Q91XZ7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb3Q91XZ7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms