Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhga9Q91XX9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga9Q91XX9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.33■□□□□ 0.52
Pcdhga9Q91XX9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga9Q91XX9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhga9Q91XX9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga9Q91XX9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga9Q91XX9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga9Q91XX9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga9Q91XX9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga9Q91XX9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhga9Q91XX9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.29■□□□□ 0.52
Pcdhga9Q91XX9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.28■□□□□ 0.52
Pcdhga9Q91XX9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga9Q91XX9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhga9Q91XX9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga9Q91XX9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga9Q91XX9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.28■□□□□ 0.52
Pcdhga9Q91XX9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga9Q91XX9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga9Q91XX9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga9Q91XX9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga9Q91XX9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms