Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Gm42642-201ENSMUST00000200683 355 ntBASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Gm10033-202ENSMUST00000211874 928 ntBASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Gm38342-201ENSMUST00000195710 2980 ntBASIC23.09■■□□□ 1.29
HnrnpuQ8VEK3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
HnrnpuQ8VEK3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.09■■□□□ 1.29
HnrnpuQ8VEK3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HnrnpuQ8VEK3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
HnrnpuQ8VEK3 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.09■■□□□ 1.29
HnrnpuQ8VEK3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
HnrnpuQ8VEK3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
HnrnpuQ8VEK3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HnrnpuQ8VEK3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HnrnpuQ8VEK3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HnrnpuQ8VEK3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HnrnpuQ8VEK3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC23.08■■□□□ 1.29
HnrnpuQ8VEK3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HnrnpuQ8VEK3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HnrnpuQ8VEK3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
HnrnpuQ8VEK3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
HnrnpuQ8VEK3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
HnrnpuQ8VEK3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC23.07■■□□□ 1.28
HnrnpuQ8VEK3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Gm45906-201ENSMUST00000208911 1430 ntBASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HnrnpuQ8VEK3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Gm18284-201ENSMUST00000172604 624 ntBASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
HnrnpuQ8VEK3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC23.04■■□□□ 1.28
HnrnpuQ8VEK3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Gm7514-201ENSMUST00000209475 934 ntBASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HnrnpuQ8VEK3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
HnrnpuQ8VEK3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HnrnpuQ8VEK3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
HnrnpuQ8VEK3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HnrnpuQ8VEK3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HnrnpuQ8VEK3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HnrnpuQ8VEK3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HnrnpuQ8VEK3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms