Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 POU5F1P4-201ENST00000413175 1085 ntBASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 AC105036.2-201ENST00000569468 176 ntBASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 AC133552.2-202ENST00000575694 574 ntBASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 AC080038.3-201ENST00000623346 1952 ntBASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 AC092053.2-201ENST00000640557 1818 ntBASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 AL138781.1-201ENST00000566567 1274 ntBASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 AC003102.1-202ENST00000563394 1796 ntBASIC21.92■■□□□ 1.1
SH3RF2Q8TEC5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 AC068338.2-201ENST00000563278 1430 ntBASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF2Q8TEC5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 AC079834.2-201ENST00000609776 1949 ntBASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3RF2Q8TEC5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.89■■□□□ 1.1
SH3RF2Q8TEC5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SH3RF2Q8TEC5 AC127496.7-201ENST00000625110 1798 ntBASIC21.89■■□□□ 1.1
SH3RF2Q8TEC5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SH3RF2Q8TEC5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.89■■□□□ 1.1
SH3RF2Q8TEC5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.89■■□□□ 1.09
SH3RF2Q8TEC5 CYP2T1P-201ENST00000432607 1285 ntBASIC21.89■■□□□ 1.09
SH3RF2Q8TEC5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.89■■□□□ 1.09
SH3RF2Q8TEC5 AC007322.4-201ENST00000509611 723 ntBASIC21.89■■□□□ 1.09
SH3RF2Q8TEC5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.89■■□□□ 1.09
SH3RF2Q8TEC5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF2Q8TEC5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF2Q8TEC5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF2Q8TEC5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH3RF2Q8TEC5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms