Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3kbp1Q8R550 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3kbp1Q8R550 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Gm20760-201ENSMUST00000179197 648 ntBASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sh3kbp1Q8R550 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3kbp1Q8R550 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3kbp1Q8R550 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3kbp1Q8R550 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3kbp1Q8R550 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3kbp1Q8R550 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3kbp1Q8R550 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3kbp1Q8R550 Gm20049-201ENSMUST00000219950 730 ntBASIC19.01■□□□□ 0.63
Sh3kbp1Q8R550 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.01■□□□□ 0.63
Sh3kbp1Q8R550 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.01■□□□□ 0.63
Sh3kbp1Q8R550 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3kbp1Q8R550 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3kbp1Q8R550 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Gm22240-201ENSMUST00000175225 82 ntBASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3kbp1Q8R550 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.99■□□□□ 0.63
Sh3kbp1Q8R550 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms