Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Gm18959-201ENSMUST00000208954 655 ntBASIC19.23■□□□□ 0.67
Foxe1Q8R2I0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxe1Q8R2I0 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.23■□□□□ 0.67
Foxe1Q8R2I0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxe1Q8R2I0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
Foxe1Q8R2I0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxe1Q8R2I0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Foxe1Q8R2I0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxe1Q8R2I0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxe1Q8R2I0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Gm10138-203ENSMUST00000206952 366 ntBASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxe1Q8R2I0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxe1Q8R2I0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxe1Q8R2I0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxe1Q8R2I0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxe1Q8R2I0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxe1Q8R2I0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxe1Q8R2I0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.21■□□□□ 0.67
Foxe1Q8R2I0 Gm18025-201ENSMUST00000221733 862 ntBASIC19.21■□□□□ 0.67
Foxe1Q8R2I0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxe1Q8R2I0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Gm14859-201ENSMUST00000117752 357 ntBASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Mtag2-201ENSMUST00000058665 714 ntBASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.2■□□□□ 0.66
Foxe1Q8R2I0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.19■□□□□ 0.66
Foxe1Q8R2I0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Gm12382-201ENSMUST00000122005 922 ntBASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxe1Q8R2I0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Foxe1Q8R2I0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Foxe1Q8R2I0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.17■□□□□ 0.66
Foxe1Q8R2I0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Foxe1Q8R2I0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxe1Q8R2I0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Foxe1Q8R2I0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxe1Q8R2I0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Foxe1Q8R2I0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Ank2-226ENSMUST00000189368 339 ntBASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Gm42545-201ENSMUST00000202755 922 ntBASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Iqck-206ENSMUST00000208658 2891 ntBASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Foxe1Q8R2I0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms