Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Gm18284-201ENSMUST00000172604 624 ntBASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Gm18671-201ENSMUST00000214826 683 ntBASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnt1Q8K1J6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnt1Q8K1J6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnt1Q8K1J6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trnt1Q8K1J6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Gm7514-201ENSMUST00000209475 934 ntBASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trnt1Q8K1J6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 AV356131-201ENSMUST00000206201 750 ntBASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trnt1Q8K1J6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trnt1Q8K1J6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trnt1Q8K1J6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trnt1Q8K1J6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trnt1Q8K1J6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trnt1Q8K1J6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trnt1Q8K1J6 Gm6420-201ENSMUST00000193885 723 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms