Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clip4Q8CI96 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clip4Q8CI96 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.6■□□□□ 0.57
Clip4Q8CI96 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Clip4Q8CI96 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.6■□□□□ 0.57
Clip4Q8CI96 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.6■□□□□ 0.57
Clip4Q8CI96 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clip4Q8CI96 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clip4Q8CI96 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Clip4Q8CI96 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clip4Q8CI96 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Clip4Q8CI96 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clip4Q8CI96 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.59■□□□□ 0.57
Clip4Q8CI96 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Clip4Q8CI96 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clip4Q8CI96 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clip4Q8CI96 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clip4Q8CI96 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clip4Q8CI96 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clip4Q8CI96 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clip4Q8CI96 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clip4Q8CI96 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.57■□□□□ 0.56
Clip4Q8CI96 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clip4Q8CI96 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.56■□□□□ 0.56
Clip4Q8CI96 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.56■□□□□ 0.56
Clip4Q8CI96 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip4Q8CI96 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clip4Q8CI96 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Clip4Q8CI96 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.55■□□□□ 0.56
Clip4Q8CI96 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.55■□□□□ 0.56
Clip4Q8CI96 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Clip4Q8CI96 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Clip4Q8CI96 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.55■□□□□ 0.56
Clip4Q8CI96 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms