Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Lin9Q8C735 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin9Q8C735 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Lin9Q8C735 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin9Q8C735 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.23■□□□□ 0.83
Lin9Q8C735 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin9Q8C735 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.23■□□□□ 0.83
Lin9Q8C735 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin9Q8C735 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Lin9Q8C735 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin9Q8C735 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin9Q8C735 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.22■□□□□ 0.83
Lin9Q8C735 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.22■□□□□ 0.83
Lin9Q8C735 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin9Q8C735 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lin9Q8C735 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lin9Q8C735 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lin9Q8C735 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Lin9Q8C735 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lin9Q8C735 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin9Q8C735 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin9Q8C735 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lin9Q8C735 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.21■□□□□ 0.83
Lin9Q8C735 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.21■□□□□ 0.83
Lin9Q8C735 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.21■□□□□ 0.83
Lin9Q8C735 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Lin9Q8C735 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin9Q8C735 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lin9Q8C735 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin9Q8C735 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lin9Q8C735 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lin9Q8C735 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lin9Q8C735 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin9Q8C735 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin9Q8C735 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin9Q8C735 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin9Q8C735 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.2■□□□□ 0.82
Lin9Q8C735 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin9Q8C735 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.2■□□□□ 0.82
Lin9Q8C735 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin9Q8C735 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Lin9Q8C735 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.19■□□□□ 0.82
Lin9Q8C735 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin9Q8C735 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.19■□□□□ 0.82
Lin9Q8C735 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.19■□□□□ 0.82
Lin9Q8C735 Gm13146-201ENSMUST00000118508 780 ntBASIC20.19■□□□□ 0.82
Lin9Q8C735 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.19■□□□□ 0.82
Lin9Q8C735 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Lin9Q8C735 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin9Q8C735 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.19■□□□□ 0.82
Lin9Q8C735 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin9Q8C735 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.19■□□□□ 0.82
Lin9Q8C735 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin9Q8C735 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lin9Q8C735 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin9Q8C735 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.18■□□□□ 0.82
Lin9Q8C735 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.18■□□□□ 0.82
Lin9Q8C735 Gm12441-201ENSMUST00000121806 588 ntBASIC20.18■□□□□ 0.82
Lin9Q8C735 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.18■□□□□ 0.82
Lin9Q8C735 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin9Q8C735 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lin9Q8C735 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin9Q8C735 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin9Q8C735 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin9Q8C735 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.17■□□□□ 0.82
Lin9Q8C735 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.17■□□□□ 0.82
Lin9Q8C735 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin9Q8C735 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin9Q8C735 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
Lin9Q8C735 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.17■□□□□ 0.82
Lin9Q8C735 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Lin9Q8C735 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lin9Q8C735 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lin9Q8C735 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lin9Q8C735 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lin9Q8C735 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.16■□□□□ 0.82
Lin9Q8C735 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.16■□□□□ 0.82
Lin9Q8C735 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms