Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Suds3Q8BR65 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.95■□□□□ 0.62
Suds3Q8BR65 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Suds3Q8BR65 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.95■□□□□ 0.62
Suds3Q8BR65 Gm10033-202ENSMUST00000211874 928 ntBASIC18.95■□□□□ 0.62
Suds3Q8BR65 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Suds3Q8BR65 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Suds3Q8BR65 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Suds3Q8BR65 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.94■□□□□ 0.62
Suds3Q8BR65 AV356131-201ENSMUST00000206201 750 ntBASIC18.94■□□□□ 0.62
Suds3Q8BR65 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Suds3Q8BR65 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Suds3Q8BR65 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.93■□□□□ 0.62
Suds3Q8BR65 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.93■□□□□ 0.62
Suds3Q8BR65 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Suds3Q8BR65 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Suds3Q8BR65 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.93■□□□□ 0.62
Suds3Q8BR65 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.93■□□□□ 0.62
Suds3Q8BR65 Gm27405-201ENSMUST00000184201 112 ntBASIC18.93■□□□□ 0.62
Suds3Q8BR65 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Suds3Q8BR65 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.93■□□□□ 0.62
Suds3Q8BR65 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.93■□□□□ 0.62
Suds3Q8BR65 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.93■□□□□ 0.62
Suds3Q8BR65 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Suds3Q8BR65 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Suds3Q8BR65 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Gm7860-201ENSMUST00000121190 879 ntBASIC18.92■□□□□ 0.62
Suds3Q8BR65 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Suds3Q8BR65 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Suds3Q8BR65 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Suds3Q8BR65 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.91■□□□□ 0.62
Suds3Q8BR65 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Suds3Q8BR65 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Suds3Q8BR65 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Suds3Q8BR65 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.91■□□□□ 0.62
Suds3Q8BR65 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Gm13234-201ENSMUST00000120010 747 ntBASIC18.9■□□□□ 0.62
Suds3Q8BR65 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.9■□□□□ 0.62
Suds3Q8BR65 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Suds3Q8BR65 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Suds3Q8BR65 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Suds3Q8BR65 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Suds3Q8BR65 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms