Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco3Q8BQM7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco3Q8BQM7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.28■□□□□ 0.04
Smco3Q8BQM7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco3Q8BQM7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco3Q8BQM7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco3Q8BQM7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.27■□□□□ 0.03
Smco3Q8BQM7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco3Q8BQM7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Smco3Q8BQM7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smco3Q8BQM7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco3Q8BQM7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Smco3Q8BQM7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smco3Q8BQM7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms