Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap4Q8BMK4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap4Q8BMK4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap4Q8BMK4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap4Q8BMK4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.52■□□□□ 0.39
Ckap4Q8BMK4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap4Q8BMK4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap4Q8BMK4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap4Q8BMK4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap4Q8BMK4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap4Q8BMK4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Ckap4Q8BMK4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap4Q8BMK4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ckap4Q8BMK4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ckap4Q8BMK4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap4Q8BMK4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms