Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Usp8Q80U87 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp8Q80U87 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Usp8Q80U87 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Usp8Q80U87 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Usp8Q80U87 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Usp8Q80U87 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp8Q80U87 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Usp8Q80U87 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Usp8Q80U87 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Usp8Q80U87 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.53■□□□□ 0.56
Usp8Q80U87 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Usp8Q80U87 Gm40848-201ENSMUST00000221998 324 ntBASIC18.53■□□□□ 0.56
Usp8Q80U87 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Usp8Q80U87 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Usp8Q80U87 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp8Q80U87 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Usp8Q80U87 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp8Q80U87 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp8Q80U87 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp8Q80U87 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp8Q80U87 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Usp8Q80U87 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp8Q80U87 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp8Q80U87 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Usp8Q80U87 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp8Q80U87 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp8Q80U87 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp8Q80U87 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp8Q80U87 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Usp8Q80U87 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Gm7860-201ENSMUST00000121190 879 ntBASIC18.51■□□□□ 0.55
Usp8Q80U87 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp8Q80U87 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp8Q80U87 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Usp8Q80U87 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Usp8Q80U87 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.5■□□□□ 0.55
Usp8Q80U87 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.5■□□□□ 0.55
Usp8Q80U87 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.5■□□□□ 0.55
Usp8Q80U87 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp8Q80U87 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms