Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prrt3Q6PE13 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Prrt3Q6PE13 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt3Q6PE13 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Prrt3Q6PE13 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Gm5643-201ENSMUST00000117081 966 ntBASIC19.45■□□□□ 0.7
Prrt3Q6PE13 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt3Q6PE13 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt3Q6PE13 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt3Q6PE13 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt3Q6PE13 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt3Q6PE13 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt3Q6PE13 Gm11249-201ENSMUST00000117071 859 ntBASIC19.44■□□□□ 0.7
Prrt3Q6PE13 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt3Q6PE13 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt3Q6PE13 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Prrt3Q6PE13 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt3Q6PE13 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt3Q6PE13 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt3Q6PE13 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt3Q6PE13 Gm2399-201ENSMUST00000104944 225 ntBASIC19.42■□□□□ 0.7
Prrt3Q6PE13 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt3Q6PE13 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt3Q6PE13 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt3Q6PE13 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt3Q6PE13 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prrt3Q6PE13 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prrt3Q6PE13 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prrt3Q6PE13 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.41■□□□□ 0.7
Prrt3Q6PE13 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.41■□□□□ 0.7
Prrt3Q6PE13 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prrt3Q6PE13 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prrt3Q6PE13 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prrt3Q6PE13 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prrt3Q6PE13 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prrt3Q6PE13 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prrt3Q6PE13 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prrt3Q6PE13 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prrt3Q6PE13 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.4■□□□□ 0.7
Prrt3Q6PE13 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.4■□□□□ 0.7
Prrt3Q6PE13 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Prrt3Q6PE13 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prrt3Q6PE13 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prrt3Q6PE13 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Prrt3Q6PE13 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.39■□□□□ 0.69
Prrt3Q6PE13 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 BC021767-201ENSMUST00000126387 1716 ntBASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prrt3Q6PE13 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prrt3Q6PE13 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms