Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim37Q6PCX9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim37Q6PCX9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim37Q6PCX9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim37Q6PCX9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Gm10819-201ENSMUST00000099988 561 ntBASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim37Q6PCX9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim37Q6PCX9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim37Q6PCX9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim37Q6PCX9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim37Q6PCX9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim37Q6PCX9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim37Q6PCX9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim37Q6PCX9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Trim37Q6PCX9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim37Q6PCX9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim37Q6PCX9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trim37Q6PCX9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.46■□□□□ 0.87
Trim37Q6PCX9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim37Q6PCX9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Trim37Q6PCX9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms