Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctnna3Q65CL1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ctnna3Q65CL1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Gm7290-201ENSMUST00000104990 617 ntBASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Gm12918-201ENSMUST00000120234 636 ntBASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Gm15710-201ENSMUST00000121821 636 ntBASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Gm38205-201ENSMUST00000192243 258 ntBASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Gm5075-201ENSMUST00000196916 622 ntBASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctnna3Q65CL1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Ctnna3Q65CL1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Ctnna3Q65CL1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.76■□□□□ 0.91
Ctnna3Q65CL1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctnna3Q65CL1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctnna3Q65CL1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Gm12527-201ENSMUST00000117967 564 ntBASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Gm22325-201ENSMUST00000158904 308 ntBASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctnna3Q65CL1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Gm5408-201ENSMUST00000197998 747 ntBASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctnna3Q65CL1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms