Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sim1Q61045 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.35■□□□□ 0.53
Sim1Q61045 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.35■□□□□ 0.53
Sim1Q61045 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sim1Q61045 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sim1Q61045 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.35■□□□□ 0.53
Sim1Q61045 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sim1Q61045 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sim1Q61045 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sim1Q61045 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sim1Q61045 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sim1Q61045 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sim1Q61045 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sim1Q61045 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.34■□□□□ 0.53
Sim1Q61045 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sim1Q61045 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sim1Q61045 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Sim1Q61045 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim1Q61045 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sim1Q61045 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sim1Q61045 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Sim1Q61045 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.33■□□□□ 0.53
Sim1Q61045 Gm12896-201ENSMUST00000118430 226 ntBASIC18.33■□□□□ 0.52
Sim1Q61045 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.33■□□□□ 0.52
Sim1Q61045 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Sim1Q61045 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.33■□□□□ 0.52
Sim1Q61045 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sim1Q61045 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sim1Q61045 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sim1Q61045 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sim1Q61045 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sim1Q61045 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sim1Q61045 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sim1Q61045 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim1Q61045 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim1Q61045 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim1Q61045 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim1Q61045 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim1Q61045 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sim1Q61045 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sim1Q61045 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Sim1Q61045 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Sim1Q61045 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sim1Q61045 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sim1Q61045 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim1Q61045 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
Sim1Q61045 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.3■□□□□ 0.52
Sim1Q61045 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.3■□□□□ 0.52
Sim1Q61045 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.3■□□□□ 0.52
Sim1Q61045 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.3■□□□□ 0.52
Sim1Q61045 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim1Q61045 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.29■□□□□ 0.52
Sim1Q61045 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sim1Q61045 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim1Q61045 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim1Q61045 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.29■□□□□ 0.52
Sim1Q61045 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Sim1Q61045 Gm5643-201ENSMUST00000117081 966 ntBASIC18.29■□□□□ 0.52
Sim1Q61045 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim1Q61045 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim1Q61045 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim1Q61045 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sim1Q61045 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sim1Q61045 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim1Q61045 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim1Q61045 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms