Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.7■□□□□ 0.42
Xrcc1Q60596 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrcc1Q60596 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Xrcc1Q60596 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.7■□□□□ 0.42
Xrcc1Q60596 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrcc1Q60596 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Xrcc1Q60596 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrcc1Q60596 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Xrcc1Q60596 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrcc1Q60596 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Xrcc1Q60596 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Xrcc1Q60596 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Xrcc1Q60596 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Xrcc1Q60596 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Xrcc1Q60596 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Xrcc1Q60596 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Xrcc1Q60596 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Xrcc1Q60596 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.68■□□□□ 0.42
Xrcc1Q60596 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Xrcc1Q60596 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 BC021767-201ENSMUST00000126387 1716 ntBASIC17.67■□□□□ 0.42
Xrcc1Q60596 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xrcc1Q60596 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.66■□□□□ 0.42
Xrcc1Q60596 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrcc1Q60596 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrcc1Q60596 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Xrcc1Q60596 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrcc1Q60596 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrcc1Q60596 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrcc1Q60596 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrcc1Q60596 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrcc1Q60596 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.65■□□□□ 0.42
Xrcc1Q60596 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrcc1Q60596 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Xrcc1Q60596 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Xrcc1Q60596 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Xrcc1Q60596 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.64■□□□□ 0.42
Xrcc1Q60596 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Xrcc1Q60596 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.64■□□□□ 0.41
Xrcc1Q60596 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.64■□□□□ 0.41
Xrcc1Q60596 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xrcc1Q60596 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms