Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav2Q5R1I9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav2Q5R1I9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav2Q5R1I9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav2Q5R1I9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Trav2Q5R1I9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav2Q5R1I9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Golph3-202ENSMUST00000226517 2359 ntBASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav2Q5R1I9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.75□□□□□ -0.05
Trav2Q5R1I9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav2Q5R1I9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Gm10653-202ENSMUST00000139570 835 ntBASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Gm20049-201ENSMUST00000219950 730 ntBASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav2Q5R1I9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav2Q5R1I9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Gm12527-201ENSMUST00000117967 564 ntBASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav2Q5R1I9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms