Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cracr2aQ3UP38 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cracr2aQ3UP38 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cracr2aQ3UP38 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cracr2aQ3UP38 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Gm6211-202ENSMUST00000167849 925 ntBASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cracr2aQ3UP38 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cracr2aQ3UP38 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cracr2aQ3UP38 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cracr2aQ3UP38 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cracr2aQ3UP38 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cracr2aQ3UP38 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.08■□□□□ 0.81
Cracr2aQ3UP38 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cracr2aQ3UP38 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cracr2aQ3UP38 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cracr2aQ3UP38 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Cracr2aQ3UP38 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cracr2aQ3UP38 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cracr2aQ3UP38 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cracr2aQ3UP38 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cracr2aQ3UP38 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.05■□□□□ 0.8
Cracr2aQ3UP38 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms