Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Smcr8Q3UMB5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smcr8Q3UMB5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smcr8Q3UMB5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Gm27275-201ENSMUST00000184318 272 ntBASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Smcr8Q3UMB5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smcr8Q3UMB5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smcr8Q3UMB5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smcr8Q3UMB5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smcr8Q3UMB5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smcr8Q3UMB5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smcr8Q3UMB5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smcr8Q3UMB5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smcr8Q3UMB5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Smcr8Q3UMB5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.83■□□□□ 0.77
Smcr8Q3UMB5 Gm2559-201ENSMUST00000201323 363 ntBASIC19.83■□□□□ 0.77
Smcr8Q3UMB5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
Smcr8Q3UMB5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smcr8Q3UMB5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smcr8Q3UMB5 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Gm10812-201ENSMUST00000099864 546 ntBASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smcr8Q3UMB5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smcr8Q3UMB5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smcr8Q3UMB5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smcr8Q3UMB5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smcr8Q3UMB5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Smcr8Q3UMB5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smcr8Q3UMB5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smcr8Q3UMB5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smcr8Q3UMB5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smcr8Q3UMB5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms