Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcp4P63054 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcp4P63054 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcp4P63054 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcp4P63054 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcp4P63054 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pcp4P63054 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcp4P63054 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcp4P63054 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pcp4P63054 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcp4P63054 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcp4P63054 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcp4P63054 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcp4P63054 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcp4P63054 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcp4P63054 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.63□□□□□ -0.39
Pcp4P63054 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Pcp4P63054 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.63□□□□□ -0.39
Pcp4P63054 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcp4P63054 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pcp4P63054 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcp4P63054 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcp4P63054 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcp4P63054 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcp4P63054 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcp4P63054 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcp4P63054 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcp4P63054 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Pcp4P63054 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Pcp4P63054 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.61□□□□□ -0.39
Pcp4P63054 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcp4P63054 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.61□□□□□ -0.39
Pcp4P63054 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.61□□□□□ -0.39
Pcp4P63054 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcp4P63054 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.61□□□□□ -0.39
Pcp4P63054 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcp4P63054 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcp4P63054 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcp4P63054 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcp4P63054 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcp4P63054 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Pcp4P63054 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcp4P63054 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.6□□□□□ -0.39
Pcp4P63054 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms