Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lhx1P63006 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Lhx1P63006 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Lhx1P63006 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Lhx1P63006 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.22■□□□□ 0.51
Lhx1P63006 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Lhx1P63006 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Lhx1P63006 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx1P63006 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lhx1P63006 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx1P63006 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.21■□□□□ 0.51
Lhx1P63006 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx1P63006 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx1P63006 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx1P63006 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx1P63006 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx1P63006 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.21■□□□□ 0.51
Lhx1P63006 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.21■□□□□ 0.51
Lhx1P63006 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx1P63006 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx1P63006 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx1P63006 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 Notumos-201ENSMUST00000151998 2659 ntBASIC18.2■□□□□ 0.5
Lhx1P63006 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lhx1P63006 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lhx1P63006 Gm12527-201ENSMUST00000117967 564 ntBASIC18.2■□□□□ 0.5
Lhx1P63006 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 Gm27011-201ENSMUST00000182352 972 ntBASIC18.2■□□□□ 0.5
Lhx1P63006 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lhx1P63006 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.2■□□□□ 0.5
Lhx1P63006 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx1P63006 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lhx1P63006 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx1P63006 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx1P63006 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx1P63006 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx1P63006 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx1P63006 Gm20760-201ENSMUST00000179197 648 ntBASIC18.19■□□□□ 0.5
Lhx1P63006 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx1P63006 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lhx1P63006 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx1P63006 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx1P63006 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Gm22325-201ENSMUST00000158904 308 ntBASIC18.18■□□□□ 0.5
Lhx1P63006 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Lhx1P63006 Gm2559-201ENSMUST00000201323 363 ntBASIC18.18■□□□□ 0.5
Lhx1P63006 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lhx1P63006 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Lhx1P63006 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx1P63006 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lhx1P63006 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.18■□□□□ 0.5
Lhx1P63006 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx1P63006 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx1P63006 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.17■□□□□ 0.5
Lhx1P63006 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.17■□□□□ 0.5
Lhx1P63006 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx1P63006 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx1P63006 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx1P63006 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lhx1P63006 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lhx1P63006 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx1P63006 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.16■□□□□ 0.5
Lhx1P63006 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.16■□□□□ 0.5
Lhx1P63006 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx1P63006 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.16■□□□□ 0.5
Lhx1P63006 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx1P63006 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx1P63006 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms