Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.19□□□□□ -0.3
Cks1bP61025 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.18□□□□□ -0.3
Cks1bP61025 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cks1bP61025 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.18□□□□□ -0.3
Cks1bP61025 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Gm5921-201ENSMUST00000075898 882 ntBASIC13.18□□□□□ -0.3
Cks1bP61025 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.18□□□□□ -0.3
Cks1bP61025 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cks1bP61025 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cks1bP61025 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cks1bP61025 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cks1bP61025 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cks1bP61025 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Cks1bP61025 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cks1bP61025 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.17□□□□□ -0.3
Cks1bP61025 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.17□□□□□ -0.3
Cks1bP61025 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cks1bP61025 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks1bP61025 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1bP61025 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1bP61025 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cks1bP61025 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cks1bP61025 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cks1bP61025 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1bP61025 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cks1bP61025 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1bP61025 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1bP61025 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1bP61025 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1bP61025 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.16□□□□□ -0.3
Cks1bP61025 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.16□□□□□ -0.3
Cks1bP61025 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1bP61025 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.16□□□□□ -0.3
Cks1bP61025 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cks1bP61025 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cks1bP61025 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.15□□□□□ -0.3
Cks1bP61025 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cks1bP61025 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cks1bP61025 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cks1bP61025 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1bP61025 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cks1bP61025 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.15□□□□□ -0.3
Cks1bP61025 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cks1bP61025 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cks1bP61025 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Cks1bP61025 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.14□□□□□ -0.31
Cks1bP61025 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1bP61025 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cks1bP61025 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1bP61025 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1bP61025 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cks1bP61025 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1bP61025 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1bP61025 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1bP61025 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1bP61025 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1bP61025 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC13.14□□□□□ -0.31
Cks1bP61025 Gm40881-201ENSMUST00000223397 166 ntBASIC13.14□□□□□ -0.31
Cks1bP61025 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cks1bP61025 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1bP61025 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Cks1bP61025 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms