Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.67■□□□□ 0.58
SmoP56726 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SmoP56726 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SmoP56726 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SmoP56726 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SmoP56726 Gm10653-202ENSMUST00000139570 835 ntBASIC18.66■□□□□ 0.58
SmoP56726 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SmoP56726 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SmoP56726 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.66■□□□□ 0.58
SmoP56726 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.66■□□□□ 0.58
SmoP56726 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SmoP56726 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SmoP56726 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SmoP56726 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.66■□□□□ 0.58
SmoP56726 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SmoP56726 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SmoP56726 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SmoP56726 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SmoP56726 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SmoP56726 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SmoP56726 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.65■□□□□ 0.58
SmoP56726 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SmoP56726 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.65■□□□□ 0.58
SmoP56726 Gm44549-201ENSMUST00000208351 577 ntBASIC18.65■□□□□ 0.58
SmoP56726 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SmoP56726 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SmoP56726 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SmoP56726 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SmoP56726 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SmoP56726 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SmoP56726 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SmoP56726 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SmoP56726 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SmoP56726 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SmoP56726 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SmoP56726 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SmoP56726 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.63■□□□□ 0.57
SmoP56726 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.63■□□□□ 0.57
SmoP56726 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SmoP56726 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SmoP56726 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SmoP56726 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SmoP56726 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.62■□□□□ 0.57
SmoP56726 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SmoP56726 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.62■□□□□ 0.57
SmoP56726 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SmoP56726 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.62■□□□□ 0.57
SmoP56726 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.62■□□□□ 0.57
SmoP56726 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SmoP56726 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SmoP56726 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SmoP56726 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SmoP56726 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SmoP56726 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SmoP56726 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SmoP56726 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SmoP56726 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.61■□□□□ 0.57
SmoP56726 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SmoP56726 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SmoP56726 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SmoP56726 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SmoP56726 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SmoP56726 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SmoP56726 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SmoP56726 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SmoP56726 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.6■□□□□ 0.57
SmoP56726 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.6■□□□□ 0.57
SmoP56726 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.6■□□□□ 0.57
SmoP56726 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SmoP56726 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms