Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcs2P54869 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.73■□□□□ 0.91
Hmgcs2P54869 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.73■□□□□ 0.91
Hmgcs2P54869 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.72■□□□□ 0.91
Hmgcs2P54869 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Mir5122-201ENSMUST00000175004 89 ntBASIC20.72■□□□□ 0.91
Hmgcs2P54869 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgcs2P54869 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcs2P54869 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Hmgcs2P54869 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcs2P54869 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Hmgcs2P54869 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hmgcs2P54869 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcs2P54869 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgcs2P54869 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Hmgcs2P54869 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Hmgcs2P54869 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.7■□□□□ 0.9
Hmgcs2P54869 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.7■□□□□ 0.9
Hmgcs2P54869 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgcs2P54869 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcs2P54869 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgcs2P54869 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hmgcs2P54869 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcs2P54869 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcs2P54869 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.68■□□□□ 0.9
Hmgcs2P54869 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.68■□□□□ 0.9
Hmgcs2P54869 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcs2P54869 Zfp783-201ENSMUST00000095946 670 ntBASIC20.68■□□□□ 0.9
Hmgcs2P54869 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Hmgcs2P54869 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcs2P54869 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgcs2P54869 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hmgcs2P54869 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Gm11643-201ENSMUST00000119578 864 ntBASIC20.67■□□□□ 0.9
Hmgcs2P54869 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcs2P54869 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.67■□□□□ 0.9
Hmgcs2P54869 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcs2P54869 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Gm9987-201ENSMUST00000069768 567 ntBASIC20.67■□□□□ 0.9
Hmgcs2P54869 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hmgcs2P54869 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.66■□□□□ 0.9
Hmgcs2P54869 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Gm5417-201ENSMUST00000079706 384 ntBASIC20.66■□□□□ 0.9
Hmgcs2P54869 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgcs2P54869 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcs2P54869 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcs2P54869 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms