Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RoraP51448 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RoraP51448 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RoraP51448 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RoraP51448 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RoraP51448 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.48■□□□□ 0.39
RoraP51448 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RoraP51448 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.48■□□□□ 0.39
RoraP51448 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RoraP51448 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.47■□□□□ 0.39
RoraP51448 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.47■□□□□ 0.39
RoraP51448 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RoraP51448 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
RoraP51448 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RoraP51448 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RoraP51448 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RoraP51448 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RoraP51448 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RoraP51448 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RoraP51448 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RoraP51448 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.46■□□□□ 0.39
RoraP51448 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RoraP51448 Gm13168-201ENSMUST00000121771 632 ntBASIC17.46■□□□□ 0.39
RoraP51448 Trmt13-210ENSMUST00000198454 880 ntBASIC17.46■□□□□ 0.39
RoraP51448 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.46■□□□□ 0.39
RoraP51448 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RoraP51448 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RoraP51448 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RoraP51448 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.45■□□□□ 0.38
RoraP51448 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RoraP51448 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RoraP51448 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RoraP51448 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RoraP51448 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RoraP51448 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RoraP51448 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.44■□□□□ 0.38
RoraP51448 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RoraP51448 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RoraP51448 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.44■□□□□ 0.38
RoraP51448 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RoraP51448 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.44■□□□□ 0.38
RoraP51448 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RoraP51448 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RoraP51448 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RoraP51448 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RoraP51448 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RoraP51448 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RoraP51448 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RoraP51448 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.43■□□□□ 0.38
RoraP51448 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RoraP51448 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RoraP51448 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RoraP51448 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.42■□□□□ 0.38
RoraP51448 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RoraP51448 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.42■□□□□ 0.38
RoraP51448 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.42■□□□□ 0.38
RoraP51448 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RoraP51448 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RoraP51448 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RoraP51448 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms