Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm15710-201ENSMUST00000121821 636 ntBASIC16.8■□□□□ 0.28
Cd40P27512 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.8■□□□□ 0.28
Cd40P27512 Gm5075-201ENSMUST00000196916 622 ntBASIC16.8■□□□□ 0.28
Cd40P27512 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.8■□□□□ 0.28
Cd40P27512 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.8■□□□□ 0.28
Cd40P27512 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.8■□□□□ 0.28
Cd40P27512 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40P27512 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40P27512 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.79■□□□□ 0.28
Cd40P27512 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40P27512 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.79■□□□□ 0.28
Cd40P27512 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40P27512 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40P27512 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40P27512 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cd40P27512 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.79■□□□□ 0.28
Cd40P27512 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40P27512 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.78■□□□□ 0.28
Cd40P27512 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cd40P27512 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.78■□□□□ 0.28
Cd40P27512 Gm6365-201ENSMUST00000054711 744 ntBASIC16.78■□□□□ 0.28
Cd40P27512 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.78■□□□□ 0.28
Cd40P27512 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.78■□□□□ 0.28
Cd40P27512 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cd40P27512 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40P27512 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40P27512 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40P27512 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40P27512 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.77■□□□□ 0.28
Cd40P27512 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.77■□□□□ 0.28
Cd40P27512 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.77■□□□□ 0.28
Cd40P27512 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40P27512 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd40P27512 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40P27512 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40P27512 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40P27512 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40P27512 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd40P27512 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40P27512 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cd40P27512 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40P27512 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40P27512 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.76■□□□□ 0.27
Cd40P27512 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cd40P27512 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cd40P27512 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40P27512 Gm37179-201ENSMUST00000194862 823 ntBASIC16.76■□□□□ 0.27
Cd40P27512 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.76■□□□□ 0.27
Cd40P27512 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40P27512 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cd40P27512 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.76■□□□□ 0.27
Cd40P27512 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cd40P27512 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd40P27512 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cd40P27512 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.75■□□□□ 0.27
Cd40P27512 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Cd40P27512 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.75■□□□□ 0.27
Cd40P27512 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd40P27512 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cd40P27512 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cd40P27512 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40P27512 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cd40P27512 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.74■□□□□ 0.27
Cd40P27512 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.74■□□□□ 0.27
Cd40P27512 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.74■□□□□ 0.27
Cd40P27512 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40P27512 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Cd40P27512 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40P27512 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40P27512 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40P27512 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cd40P27512 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40P27512 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40P27512 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cd40P27512 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms