Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a2P08122 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a2P08122 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a2P08122 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a2P08122 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a2P08122 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a2P08122 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a2P08122 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col4a2P08122 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.41■□□□□ 0.38
Col4a2P08122 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.41■□□□□ 0.38
Col4a2P08122 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col4a2P08122 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col4a2P08122 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a2P08122 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.41■□□□□ 0.38
Col4a2P08122 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a2P08122 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col4a2P08122 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col4a2P08122 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a2P08122 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a2P08122 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a2P08122 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a2P08122 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Col4a2P08122 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.4■□□□□ 0.38
Col4a2P08122 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a2P08122 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a2P08122 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a2P08122 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Col4a2P08122 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col4a2P08122 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Col4a2P08122 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a2P08122 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a2P08122 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a2P08122 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a2P08122 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.39■□□□□ 0.37
Col4a2P08122 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a2P08122 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.38■□□□□ 0.37
Col4a2P08122 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col4a2P08122 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col4a2P08122 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.38■□□□□ 0.37
Col4a2P08122 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Gm10231-201ENSMUST00000181584 441 ntBASIC17.38■□□□□ 0.37
Col4a2P08122 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Gm10175-202ENSMUST00000208752 441 ntBASIC17.38■□□□□ 0.37
Col4a2P08122 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a2P08122 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col4a2P08122 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col4a2P08122 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.37■□□□□ 0.37
Col4a2P08122 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col4a2P08122 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col4a2P08122 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col4a2P08122 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a2P08122 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.36■□□□□ 0.37
Col4a2P08122 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.36■□□□□ 0.37
Col4a2P08122 Gm9987-201ENSMUST00000069768 567 ntBASIC17.36■□□□□ 0.37
Col4a2P08122 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.36■□□□□ 0.37
Col4a2P08122 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.36■□□□□ 0.37
Col4a2P08122 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms