Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igh-VJ558P01758 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igh-VJ558P01758 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igh-VJ558P01758 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igh-VJ558P01758 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igh-VJ558P01758 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igh-VJ558P01758 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igh-VJ558P01758 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igh-VJ558P01758 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Igh-VJ558P01758 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.06■□□□□ 0.16
Igh-VJ558P01758 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igh-VJ558P01758 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igh-VJ558P01758 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.06■□□□□ 0.16
Igh-VJ558P01758 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.06■□□□□ 0.16
Igh-VJ558P01758 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igh-VJ558P01758 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igh-VJ558P01758 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igh-VJ558P01758 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Gm6420-201ENSMUST00000193885 723 ntBASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Igh-VJ558P01758 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Gm42642-201ENSMUST00000200683 355 ntBASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Gm5874-201ENSMUST00000096101 508 ntBASIC16.02■□□□□ 0.16
Igh-VJ558P01758 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igh-VJ558P01758 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igh-VJ558P01758 Grk6-206ENSMUST00000224995 2971 ntBASIC16.02■□□□□ 0.15
Igh-VJ558P01758 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igh-VJ558P01758 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms