Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh16O88338 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdh16O88338 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.15■□□□□ 0.5
Cdh16O88338 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.15■□□□□ 0.5
Cdh16O88338 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh16O88338 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh16O88338 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cdh16O88338 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh16O88338 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh16O88338 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh16O88338 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh16O88338 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh16O88338 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh16O88338 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.14■□□□□ 0.5
Cdh16O88338 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdh16O88338 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cdh16O88338 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh16O88338 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cdh16O88338 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh16O88338 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh16O88338 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cdh16O88338 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh16O88338 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh16O88338 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh16O88338 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh16O88338 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh16O88338 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh16O88338 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdh16O88338 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Cdh16O88338 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Cdh16O88338 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
Cdh16O88338 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cdh16O88338 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdh16O88338 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cdh16O88338 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh16O88338 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh16O88338 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.12■□□□□ 0.49
Cdh16O88338 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh16O88338 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh16O88338 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh16O88338 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cdh16O88338 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh16O88338 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.12■□□□□ 0.49
Cdh16O88338 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cdh16O88338 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh16O88338 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.12■□□□□ 0.49
Cdh16O88338 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdh16O88338 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.11■□□□□ 0.49
Cdh16O88338 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.11■□□□□ 0.49
Cdh16O88338 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cdh16O88338 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.11■□□□□ 0.49
Cdh16O88338 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh16O88338 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdh16O88338 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh16O88338 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdh16O88338 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh16O88338 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh16O88338 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh16O88338 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.1■□□□□ 0.49
Cdh16O88338 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh16O88338 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdh16O88338 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cdh16O88338 Gm12922-201ENSMUST00000120626 809 ntBASIC18.09■□□□□ 0.49
Cdh16O88338 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.09■□□□□ 0.49
Cdh16O88338 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.09■□□□□ 0.49
Cdh16O88338 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.09■□□□□ 0.49
Cdh16O88338 Golgb1-201ENSMUST00000023534 498 ntBASIC18.09■□□□□ 0.49
Cdh16O88338 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms