Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.64□□□□□ -0.07
Pde6dO55057 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pde6dO55057 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.63□□□□□ -0.07
Pde6dO55057 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pde6dO55057 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pde6dO55057 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.62□□□□□ -0.07
Pde6dO55057 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Pde6dO55057 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.62□□□□□ -0.07
Pde6dO55057 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.62□□□□□ -0.07
Pde6dO55057 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.62□□□□□ -0.07
Pde6dO55057 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pde6dO55057 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pde6dO55057 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.62□□□□□ -0.07
Pde6dO55057 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Pde6dO55057 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pde6dO55057 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pde6dO55057 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Pde6dO55057 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Pde6dO55057 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.61□□□□□ -0.07
Pde6dO55057 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.61□□□□□ -0.07
Pde6dO55057 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.61□□□□□ -0.07
Pde6dO55057 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.61□□□□□ -0.07
Pde6dO55057 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.61□□□□□ -0.07
Pde6dO55057 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pde6dO55057 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.61□□□□□ -0.07
Pde6dO55057 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pde6dO55057 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Pde6dO55057 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.6□□□□□ -0.07
Pde6dO55057 Gm9870-201ENSMUST00000063874 645 ntBASIC14.6□□□□□ -0.07
Pde6dO55057 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pde6dO55057 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.6□□□□□ -0.07
Pde6dO55057 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pde6dO55057 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.6□□□□□ -0.07
Pde6dO55057 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pde6dO55057 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pde6dO55057 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms