Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trdmt1O55055 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trdmt1O55055 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trdmt1O55055 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trdmt1O55055 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trdmt1O55055 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trdmt1O55055 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trdmt1O55055 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.51■□□□□ 0.87
Trdmt1O55055 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.51■□□□□ 0.87
Trdmt1O55055 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trdmt1O55055 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trdmt1O55055 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trdmt1O55055 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trdmt1O55055 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.51■□□□□ 0.87
Trdmt1O55055 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trdmt1O55055 Gm11643-201ENSMUST00000119578 864 ntBASIC20.5■□□□□ 0.87
Trdmt1O55055 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.5■□□□□ 0.87
Trdmt1O55055 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trdmt1O55055 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trdmt1O55055 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.5■□□□□ 0.87
Trdmt1O55055 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trdmt1O55055 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trdmt1O55055 Notumos-201ENSMUST00000151998 2659 ntBASIC20.5■□□□□ 0.87
Trdmt1O55055 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trdmt1O55055 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trdmt1O55055 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trdmt1O55055 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trdmt1O55055 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.49■□□□□ 0.87
Trdmt1O55055 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trdmt1O55055 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trdmt1O55055 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trdmt1O55055 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trdmt1O55055 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Trdmt1O55055 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Trdmt1O55055 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Golph3-202ENSMUST00000226517 2359 ntBASIC20.48■□□□□ 0.87
Trdmt1O55055 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trdmt1O55055 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Gm10138-203ENSMUST00000206952 366 ntBASIC20.47■□□□□ 0.87
Trdmt1O55055 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.47■□□□□ 0.87
Trdmt1O55055 Gm9987-201ENSMUST00000069768 567 ntBASIC20.47■□□□□ 0.87
Trdmt1O55055 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trdmt1O55055 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trdmt1O55055 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trdmt1O55055 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trdmt1O55055 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trdmt1O55055 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trdmt1O55055 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trdmt1O55055 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.46■□□□□ 0.87
Trdmt1O55055 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trdmt1O55055 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trdmt1O55055 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.46■□□□□ 0.87
Trdmt1O55055 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trdmt1O55055 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Trdmt1O55055 Gm43183-201ENSMUST00000200632 547 ntBASIC20.46■□□□□ 0.87
Trdmt1O55055 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.46■□□□□ 0.87
Trdmt1O55055 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.46■□□□□ 0.87
Trdmt1O55055 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trdmt1O55055 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trdmt1O55055 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.46■□□□□ 0.87
Trdmt1O55055 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trdmt1O55055 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Trdmt1O55055 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trdmt1O55055 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trdmt1O55055 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.45■□□□□ 0.86
Trdmt1O55055 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.45■□□□□ 0.86
Trdmt1O55055 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trdmt1O55055 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trdmt1O55055 Gm5417-201ENSMUST00000079706 384 ntBASIC20.45■□□□□ 0.86
Trdmt1O55055 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Trdmt1O55055 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms