Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP2O43734 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 AC053503.5-201ENST00000601508 636 ntBASIC18.79■□□□□ 0.6
TRAF3IP2O43734 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP2O43734 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 KRT18P14-201ENST00000534205 1250 ntBASIC18.78■□□□□ 0.6
TRAF3IP2O43734 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF3IP2O43734 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 FEM1AP4-201ENST00000443167 1987 ntBASIC18.77■□□□□ 0.6
TRAF3IP2O43734 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAF3IP2O43734 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.77■□□□□ 0.59
TRAF3IP2O43734 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAF3IP2O43734 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 AL024507.2-201ENST00000606070 2574 ntBASIC18.75■□□□□ 0.59
TRAF3IP2O43734 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAF3IP2O43734 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRAF3IP2O43734 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms