Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf3O08791 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf3O08791 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.18■□□□□ 0.66
Ebf3O08791 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.18■□□□□ 0.66
Ebf3O08791 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ebf3O08791 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Ebf3O08791 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ebf3O08791 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf3O08791 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ebf3O08791 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ebf3O08791 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Gm2559-201ENSMUST00000201323 363 ntBASIC19.17■□□□□ 0.66
Ebf3O08791 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.17■□□□□ 0.66
Ebf3O08791 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.17■□□□□ 0.66
Ebf3O08791 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf3O08791 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ebf3O08791 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Mir6982-201ENSMUST00000184354 68 ntBASIC19.16■□□□□ 0.66
Ebf3O08791 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.16■□□□□ 0.66
Ebf3O08791 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.16■□□□□ 0.66
Ebf3O08791 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.16■□□□□ 0.66
Ebf3O08791 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf3O08791 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ebf3O08791 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf3O08791 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.15■□□□□ 0.66
Ebf3O08791 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ebf3O08791 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ebf3O08791 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ebf3O08791 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ebf3O08791 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.14■□□□□ 0.66
Ebf3O08791 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf3O08791 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.14■□□□□ 0.65
Ebf3O08791 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf3O08791 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.14■□□□□ 0.65
Ebf3O08791 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ebf3O08791 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf3O08791 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf3O08791 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf3O08791 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf3O08791 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf3O08791 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf3O08791 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf3O08791 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ebf3O08791 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.13■□□□□ 0.65
Ebf3O08791 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf3O08791 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
Ebf3O08791 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf3O08791 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf3O08791 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms