Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sema3aO08665 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sema3aO08665 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.73■□□□□ 0.59
Sema3aO08665 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.73■□□□□ 0.59
Sema3aO08665 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sema3aO08665 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sema3aO08665 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.72■□□□□ 0.59
Sema3aO08665 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Gm7290-201ENSMUST00000104990 617 ntBASIC18.72■□□□□ 0.59
Sema3aO08665 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Gm12918-201ENSMUST00000120234 636 ntBASIC18.72■□□□□ 0.59
Sema3aO08665 Gm15710-201ENSMUST00000121821 636 ntBASIC18.72■□□□□ 0.59
Sema3aO08665 Gm5075-201ENSMUST00000196916 622 ntBASIC18.72■□□□□ 0.59
Sema3aO08665 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.72■□□□□ 0.59
Sema3aO08665 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.72■□□□□ 0.59
Sema3aO08665 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.72■□□□□ 0.59
Sema3aO08665 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.72■□□□□ 0.59
Sema3aO08665 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sema3aO08665 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sema3aO08665 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sema3aO08665 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sema3aO08665 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sema3aO08665 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sema3aO08665 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sema3aO08665 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sema3aO08665 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.71■□□□□ 0.59
Sema3aO08665 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sema3aO08665 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.71■□□□□ 0.59
Sema3aO08665 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sema3aO08665 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sema3aO08665 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sema3aO08665 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sema3aO08665 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.7■□□□□ 0.58
Sema3aO08665 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.7■□□□□ 0.58
Sema3aO08665 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sema3aO08665 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.7■□□□□ 0.58
Sema3aO08665 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sema3aO08665 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sema3aO08665 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sema3aO08665 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sema3aO08665 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sema3aO08665 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sema3aO08665 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sema3aO08665 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sema3aO08665 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sema3aO08665 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.69■□□□□ 0.58
Sema3aO08665 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.69■□□□□ 0.58
Sema3aO08665 Gm37179-201ENSMUST00000194862 823 ntBASIC18.69■□□□□ 0.58
Sema3aO08665 Gm6365-201ENSMUST00000054711 744 ntBASIC18.69■□□□□ 0.58
Sema3aO08665 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sema3aO08665 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sema3aO08665 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sema3aO08665 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.68■□□□□ 0.58
Sema3aO08665 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.68■□□□□ 0.58
Sema3aO08665 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.68■□□□□ 0.58
Sema3aO08665 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sema3aO08665 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sema3aO08665 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.67■□□□□ 0.58
Sema3aO08665 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sema3aO08665 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sema3aO08665 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sema3aO08665 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sema3aO08665 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sema3aO08665 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.67■□□□□ 0.58
Sema3aO08665 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sema3aO08665 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sema3aO08665 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sema3aO08665 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sema3aO08665 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sema3aO08665 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sema3aO08665 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sema3aO08665 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.66■□□□□ 0.58
Sema3aO08665 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sema3aO08665 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.66■□□□□ 0.58
Sema3aO08665 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sema3aO08665 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.66■□□□□ 0.58
Sema3aO08665 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.66■□□□□ 0.58
Sema3aO08665 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sema3aO08665 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sema3aO08665 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sema3aO08665 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sema3aO08665 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sema3aO08665 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms