Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.77■□□□□ 0.6
Col6a3E9PWQ3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col6a3E9PWQ3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Col6a3E9PWQ3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a3E9PWQ3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Gm7370-201ENSMUST00000219471 767 ntBASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a3E9PWQ3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Gm11594-201ENSMUST00000122313 162 ntBASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a3E9PWQ3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Gm5864-201ENSMUST00000202263 970 ntBASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.73■□□□□ 0.59
Col6a3E9PWQ3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col6a3E9PWQ3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Gm15375-201ENSMUST00000119510 849 ntBASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Gm27459-201ENSMUST00000184860 107 ntBASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Flg-201ENSMUST00000050758 1488 ntBASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col6a3E9PWQ3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Col6a3E9PWQ3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Gm13884-201ENSMUST00000118103 829 ntBASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 AA386476-201ENSMUST00000098781 1665 ntBASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Gm9013-201ENSMUST00000132939 882 ntBASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col6a3E9PWQ3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col6a3E9PWQ3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.69■□□□□ 0.58
Col6a3E9PWQ3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.69■□□□□ 0.58
Col6a3E9PWQ3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col6a3E9PWQ3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms