Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv3-9A0A140T8P4 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Gm43060-201ENSMUST00000200621 289 ntBASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv3-9A0A140T8P4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Golph3-205ENSMUST00000228671 2842 ntBASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv3-9A0A140T8P4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Igkv3-9A0A140T8P4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Igkv3-9A0A140T8P4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Igkv3-9A0A140T8P4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv3-9A0A140T8P4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-9A0A140T8P4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Igkv3-9A0A140T8P4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-9A0A140T8P4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-9A0A140T8P4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-9A0A140T8P4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-9A0A140T8P4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-9A0A140T8P4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms