Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-2A0A140T8N6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-2A0A140T8N6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-2A0A140T8N6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv13-2A0A140T8N6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trbv13-2A0A140T8N6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-2A0A140T8N6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Gm10033-202ENSMUST00000211874 928 ntBASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-2A0A140T8N6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm13534-201ENSMUST00000121169 513 ntBASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-2A0A140T8N6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.88□□□□□ -0.35
Trbv13-2A0A140T8N6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 221.6 ms