Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Nespas-201ENSMUST00000143738 1083 ntBASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm6420-201ENSMUST00000193885 723 ntBASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm13534-201ENSMUST00000121169 513 ntBASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms