Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms