Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12d-3A0A075B6A4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm43530-201ENSMUST00000195920 274 ntBASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12d-3A0A075B6A4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav12d-3A0A075B6A4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav12d-3A0A075B6A4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12d-3A0A075B6A4 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.82□□□□□ -0.2
Trav12d-3A0A075B6A4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12d-3A0A075B6A4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12d-3A0A075B6A4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12d-3A0A075B6A4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav12d-3A0A075B6A4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Gm14523-201ENSMUST00000117260 558 ntBASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12d-3A0A075B6A4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12d-3A0A075B6A4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12d-3A0A075B6A4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12d-3A0A075B6A4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav12d-3A0A075B6A4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms