Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16A0A075B653 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16A0A075B653 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16A0A075B653 Gm15820-201ENSMUST00000201566 728 ntBASIC14.32□□□□□ -0.12
Trav16A0A075B653 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16A0A075B653 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16A0A075B653 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16A0A075B653 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16A0A075B653 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16A0A075B653 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.31□□□□□ -0.12
Trav16A0A075B653 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.31□□□□□ -0.12
Trav16A0A075B653 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.31□□□□□ -0.12
Trav16A0A075B653 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav16A0A075B653 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16A0A075B653 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16A0A075B653 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.29□□□□□ -0.12
Trav16A0A075B653 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Serp2-204ENSMUST00000228055 705 ntBASIC14.29□□□□□ -0.12
Trav16A0A075B653 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav16A0A075B653 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.29□□□□□ -0.12
Trav16A0A075B653 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16A0A075B653 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav16A0A075B653 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav16A0A075B653 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav16A0A075B653 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav16A0A075B653 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav16A0A075B653 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav16A0A075B653 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav16A0A075B653 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16A0A075B653 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav16A0A075B653 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.27□□□□□ -0.13
Trav16A0A075B653 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav16A0A075B653 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16A0A075B653 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav16A0A075B653 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16A0A075B653 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav16A0A075B653 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16A0A075B653 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms